BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E10SP1|AL426055
(781 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1750 1420 0.0
>3x_Contig1750
Length = 14427
Score = 1420 bits (712), Expect = 0.0
Identities = 767/782 (98%), Gaps = 6/782 (0%)
Strand = Plus / Minus
Query: 1 aagtgtcgtgcctttccatataaaaggctaatgaaaacacctagaagcgagcagatgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1595 aagtgtcgtgcctttccatataaaaggctaatgaaaacacctagaagcgagcagatgtct 1536
Query: 61 ttgaagcacaacaggctaccgtggaaccattgatattttttattataagatttaccgtga 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1535 ttgaagcacaacaggc-accgtggaaccattgatattttttattataagatttaccgtga 1477
Query: 121 gaaacttaacagtacaaaaaccagattgaaatcaacatctctgcataaaaagatgcagat 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1476 gaaacttaacagtacaaaaaccagattgaaatcaacat-tctgcataaaaagatgcagat 1418
Query: 181 aaagctcctcaaagttcctgcattatgctcaatccaattgtgaattgaaacttaacactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 aaagctcctcaaagttcctgcattatgctcaatccaattgtgaattgaaacttaacactc 1358
Query: 241 gatgtgaatatttttctcactgatgaaactattggggaaagccgtagttgaggattctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 gatgtgaatatttttctcactgatgaaactattggggaaagccgtagttgaggattctac 1298
Query: 301 actttcgtccatggcctgaattatttggtgctaaagttgtttggtttatttaatactgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 actttcgtccatggcctgaattatttggtgctaaagttgtttggtttatttaatactgga 1238
Query: 361 ctgatgttcaacgggcttgtctacgagaagatgtttcggtagtatgctatacacaaaagc 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1237 ctgatgttcaacgggcttgtctacgagaagatgtttcggtagtatg-tatacacaaaagc 1179
Query: 421 tgtgcttcgctaatacactctggtgcacatctttttttcctgccacttgagtwgttagat 480
|||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1178 tgtg-ttcg-taatacactctggtgcacatctttttttcctgccacttgagtagttagat 1121
Query: 481 tcctacttgaaaaaaaaaaaaaataagtgtttcctgc-ttcggcgaattagttttttccg 539
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1120 tcctacttgaaaaaaaaaaaaaataagtgtttcctgctttcggcgaattagttttttccg 1061
Query: 540 gcaattttccactatctcaaggtgcaacaaaatgcagatagggttagtaaatwtagctcc 599
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1060 gcaattttccactatctcaaggtgcaacaaaatgcagatagggttagtaaatatagctcc 1001
Query: 600 tgcacgtmtgttccatgagaaatatgavagctgttcatatctcttaaggccaattaamat 659
||||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||| ||
Sbjct: 1000 tgcacgtatgtaccatgagatatatgaaagctgttcatatctcttaaggccaattaaaat 941
Query: 660 ggtcgcctcatcagaaaatcactctgcwaatcgttcaaactttcacatttagcttgagaa 719
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 940 ggtcgcctcatcagaaaatcactctgcaaatcgttcaaactttcacatttagcttgagaa 881
Query: 720 acaggcaattttttttgggttttggcaagacactacattttttaatttgaacaccggyct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 880 acaggcaattttttttgggttttggcaagacactacattttttaatttgaacaccggtct 821
Query: 780 gc 781
||
Sbjct: 820 gc 819
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,519
Number of Sequences: 1807
Number of extensions: 14519
Number of successful extensions: 372
Number of sequences better than 1.0e-20: 1
length of query: 781
length of database: 10,358,551
effective HSP length: 16
effective length of query: 765
effective length of database: 10,329,639
effective search space: 7902173835
effective search space used: 7902173835
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)